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Treponema Molecular Genetics Website

Brought to you by The Treponema pallidum Molecular Genetics Group
Coordinated by Steve Norris

at The University of Texas Medical School at Houston

T. denticola    T. pallidum 2D gels   T. pallidum sequences   Address Book, etc.

Treponema denticola ATCC 35405 Sequence (15 Jan. 2004)

• DNA Sequence

• Predicted Protein Sequences

• Predicted ORFs

• Gene Coordinates with Descriptions (text file)

• Gene Coordinates with Descriptions (Excel file)

• Baylor College of Medicine, T. denticola Genome Project Website (Includes BlastN, TBlastN, and FTP services)

• Publication: Seshadri et al. PNAS (USA) 101 (15): 5646. (2004)

T. pallidum proteome 2D gel

• General information about syphilis and Treponema pallidum (from the CDC)

• STD Sequence Databases, Los Alamos National Laboratory Contains detailed information on each T. pallidum ORF, a gene image map, functional searches, EC table, biochemical pathways, etc.

• T. pallidum genome sequence article published in Science 281:375-388 (July 17, 1998) PubMed Entry, Reprint Request

T. pallidum sequences

• Display T. pallidum DNA sequence gtp4.1.seq (posted 17 July, 1998) 1157017 bytes

• Gene list with coordinates, Version 4.1 (17 July, 1998)

• Peptide sequences, Version 4.1 (posted 17 July, 1998) 422727 bytes

• Open reading frame sequences, Version 4.1 (posted 17 July, 1998) 1141364 bytes

• Codon frequency table, Version 4.1 (posted 17 July, 1998)

• Instructions for downloading T. pallidum genome files by ftp

• About version numbers

• Physical maps of the Treponema pallidum subsp. pallidum Nichols genome: Version 1.5 (97/6/30)

Address Book, Spirochete List Server, and Other Information

• Address Book
  Members of the spirochete research community

• Spirochete List Server
  An easy way to broadcast email messages to the spirochete research community (This resource is only available to individuals listed in the Address Book above)

• International Leptospirosis Society
  http://www.med.monash.edu.au/microbiology/staff/adler/ils.html

Selected UT-Houston Web Pages

• Department of Microbiology and Molecular Genetics
• University of Texas - Houston Graduate School of Biomedical Sciences